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Amber |
Molecular Dynamics: Assisted Model Building with Energy Refinement |
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ATLAS |
Automatically Tuned Linear Algebra Software |
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AutoDock |
A suite of automated docking tools |
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Basic Linear Algebra Subroutines |
Building block routines for performing basic vector and matrix operations. |
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BLASTZ |
A genome alignment tool |
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Cern Program Library |
The CERN Program Library is a large collection of general purpose libraries |
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Chaco |
Chaco is a multi-level graph partitioning package |
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Charm |
Charm++ is a parallel object-oriented programming language based on C++. |
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Climate Data Operators |
NetCDF aware Common Data Operators |
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Cmake |
Cross platform build system |
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CPMD |
Car-Parrinello Molecular Dynamics w/ MPI & SMP |
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CRI-MAP |
The main purpose of CRI-MAP is to allow rapid, largely automated construction of multilocus linkage maps |
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Emacs |
Emacs is an extensible, customizable text editor |
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Fast Fourier Transforms |
Real and complex discrete Fourier transforms |
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Gamess |
The General Atomic and Molecular Electronic Structure System |
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Global Arrays |
The Global Arrays (GA) toolkit provides an efficient and portable "shared-memory" programming interface for distributed-memory computers |
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GNU compiler collection |
C, C++, Fortran, Objective-C, Java and Ada compilers |
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GNU Multiple Precision Arithmetic Library |
A free library for arbitrary precision arithmetic |
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Gnu Scientific Library |
A numerical library for C and C++ programmers |
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Grace |
Grace is a WYSIWYG 2D plotting tool for the X Window System |
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Graphviz |
Graph Visualization Software |
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Gromacs |
A molecular dynamics package |
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HDF5 |
Hierarchical Data Format |
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Image Magick |
ImageMagick is a software suite to create, edit, and compose bitmap images. |
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Isolation and Migration Model |
Fitting an isolation model with migration to haplotype data |
